CDS

Accession Number TCMCG083C18894
gbkey CDS
Protein Id KMZ74794.1
Location join(318372..318453,318559..318599,318722..318851,318928..319133,319234..319401,319819..319869,320000..320179,320289..320294)
Organism Zostera marina
locus_tag ZOSMA_122G00620

Protein

Length 287aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA41721, BioSample:SAMN00991190
db_source LFYR01000244.1
Definition U2 small nuclear ribonucleoprotein A [Zostera marina]
Locus_tag ZOSMA_122G00620

EGGNOG-MAPPER Annotation

COG_category A
Description occurring C-terminal to leucine-rich repeats
KEGG_TC -
KEGG_Module M00352        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K11092        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015030        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGCGGTTTACGGCGGACCTCGTTTGGAAGAGTCCACACTTCTTCAATGCAATCGGCGAGCGCGAGTTGGATCTTCGAGGTAACAAGATCGCTGTGATAGAGAACGTTAGTGCCACTGAGGATCAATTTGATACCATAGACCTTTCCGACAATGAGATTGTTAAACTTGAAAATTTTCCTCCCATGAACCGTCTTGGAACACTCTTGATCAACAATAATAGAATTACTAGGATTAATCCTAACATTGGAGAATATTTGCCGAGGTTGCATACCTTGATTCTCACAAATAACCGACTTGTAAACTTAGTTGAAATCGATCCCCTTGCTTCCCTTCCTAAGTTGCAGACTCTGAGCCTGCTGGATAATAATATTACAAAGAAACCAAATTATCGTTTATATGTGATATTCAAATTGAAAAATCTTCGCTTGCTAGATTTCAGGAAAGTGAAACTAAAGGAGAAGACCGAGGCTGATAGATTATTTGCAACAAAAGAAGCACAGGAGGAGGTTAAAAAGATACCGGTAAAAACATTTACGCCTGGTGAGGTACCACAGGATCTCGATGTATCAAAAGAAGCCCCTAAAGTCACTGTCCCCACTGCAGAGCAAATAACTGCTATTAAGGCTGCAATTGTCAACTCTCAAACACTAGAAGAAGTTGCAAGACTTGAACAGGCTTTGAAAACCGGACAACTTCCTGCTGATTTATTGATTCCTGATGATGACACTGCAGCCACGGTGAATGAGGAGGACAGCAATCAAATGGACGTCGATAATACTACTAGCAAAACTTCAGACAAGTCAAAACCAGGCGAAGAGTCTCGTACTACTGACTCCCCCATACCAATTGATGAGGATTAA
Protein:  
MVRFTADLVWKSPHFFNAIGERELDLRGNKIAVIENVSATEDQFDTIDLSDNEIVKLENFPPMNRLGTLLINNNRITRINPNIGEYLPRLHTLILTNNRLVNLVEIDPLASLPKLQTLSLLDNNITKKPNYRLYVIFKLKNLRLLDFRKVKLKEKTEADRLFATKEAQEEVKKIPVKTFTPGEVPQDLDVSKEAPKVTVPTAEQITAIKAAIVNSQTLEEVARLEQALKTGQLPADLLIPDDDTAATVNEEDSNQMDVDNTTSKTSDKSKPGEESRTTDSPIPIDED